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Teaching Computers to Recognize Sick Guts: Machine-Learning and the Microbiome
A new proof-of-concept study by researchers from the University of California San Diego succeeded in training computers to “learn” what a healthy versus an unhealthy gut microbiome looks like based on its genetic makeup.
National Academy of Medicine Elects 80 New Members
J. Craig Venter, Ph.D. among inductees
Team of scientists uncover copper poisoning as ancient mechanism in bacterial predation by protozoa
USAID Announces Initial Results of Grand Challenge to Combat Zika
USAID Invests Over $15 Million to Accelerate Development and Deployment of 21 Innovations to Combat the Spread of Zika
Teams at Venter Institute and Synthetic Genomics, Inc. Successfully Engineer 16S rRNA using One Step Process Combining CRISPR/Cas9 Systems and Yeast Recombination Machinery
Professor Karen Nelson Receives Helmholtz International Fellow Award
Vanderbilt and the Human Vaccines Project Launch Initial Studies to Decode the Human Immune System
New initiative to accelerate the development of next-generation vaccines and immunotherapies
Leonardo da Vinci's DNA: Experts unite to shine modern light on a Renaissance genius
The Leonardo Project: Illuminating the art, life, characteristics, talents, and brilliance of one of humanity's most extraordinary figures
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A Positive Charge
I’m thinking of the day’s schedule school visit, the activity and the positive charge it will produce in me and the students. I get so excited during our school visits. It’s like the feeling I get on Saturday morning while watching my favorite cartoons. (Yes, I still watch...
We Had Fun with Genomics!
Wow! It’s been an exciting week!! Crystal Snowden and I flew to San Diego Friday, March 5th – jumped off the plane and the fun began! We went straight to the lab and set up for BEWiSE and prepped for Expanding Your Horizons (EYH). We are really fortunate to have such a great team in the...
Scientist Spotlight: Orianna Bretschger
Most of us have never thought about how to make more water or cleaner water or develop unique sources of energy but that’s exactly what Orianna Bretschger does at JCVI. She is working at the intersection of engineering, physics, and biology to design small machines powered by bacteria that...
Having Fun with Genomics
I am the generation after landing on the moon. As a child, I don’t recall having any science inspiration. I was fortunate to have parents that made it possible for me and my siblings to get a very good education. I went to a small parochial school outside of Washington, DC. It was a great...
AGBT, Marco Island 2010
I just got back from AGBT in Marco Island, Florida and I am still in awe. As noted in the name, this conference highlights advances in both genome biology and technology. The biology seemed to be very human genome centric. Many of the talks presented full genome sequences of cancer genomes or...
Influenza H1N1pdm sequencing project overview
Since 2004, the JCVI Influenza Genome Sequencing Project, funded by the National Institute of Allergy and Infectious Diseases (NIAID), has sequenced thousands of human, swine, and avian influenza isolates from collections around the world to provide researchers with a better understanding of...
High Impact Science in Antarctica
Big changes in store for the Mertz Polynya: in February 2010 iceberg 9B9 collided with the Mertz Glacier, breaking the 70 km floating glacier off at the base. The Mertz Polynya was extensivley sampled by scientists at the JCVI in the summer of 2007/08, and this metagenomic survey will form an important baseline for evaluating on-going changes in the area.
Rocky Hill MS Explodes with Science
Mrs. Jill Maisch is the 7th Grade Science teacher at Rocky Hill Middle School who is responsible for the explosion with Science in Clarksburg MD. She, along with new teachers and veteran teachers to the DiscoverGenomics! Science Education Program attended our annual professional development...
New ways to analyze metagenomics data
Are you looking for new tools to analyze your metagenomics data? Are you using MG-RAST, IMG/M or MEGAN for your daily metagenomics work? JCVI is working on a user friendly alternative that you might be looking for - a new tool kit for metagenomics data visualization and analysis...
DNA microarrays vs RNAseq — The winner and new heavyweight champion is?... It’s a draw.
In the past year or so there have been several articles stating that the death of microarray technology is growing near. These proclamations are due to the more recently introduced methodology referred to as RNAseq. At first glance I wrote these claims off as being silly and premature. Over...
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Can CRISPR help stop African Swine Fever?
Gene editing could create a successful vaccine to protect against the viral disease that has killed close to 2 million pigs globally since 2021.
Getting Under the Skin
Amid an insulin crisis, one project aims to engineer microscopic insulin pumps out of a skin bacterium.
Planet Microbe
There are more organisms in the sea, a vital producer of oxygen on Earth, than planets and stars in the universe.
The Next Climate Change Calamity?: We’re Ruining the Microbiome, According to Human-Genome-Pioneer Craig Venter
In a new book (coauthored with Venter), a Vanity Fair contributor presents the oceanic evidence that human activity is altering the fabric of life on a microscopic scale.
Lessons from the Minimal Cell
“Despite reducing the sequence space of possible trajectories, we conclude that streamlining does not constrain fitness evolution and diversification of populations over time. Genome minimization may even create opportunities for evolutionary exploitation of essential genes, which are commonly observed to evolve more slowly.”
Even Synthetic Life Forms With a Tiny Genome Can Evolve
By watching “minimal” cells regain the fitness they lost, researchers are testing whether a genome can be too simple to evolve.
Privacy concerns sparked by human DNA accidentally collected in studies of other species
Two research teams warn that human genomic “bycatch” can reveal private information
Scientists Unveil a More Diverse Human Genome
The “pangenome,” which collated genetic sequences from 47 people of diverse ethnic backgrounds, could greatly expand the reach of personalized medicine.
First human ‘pangenome’ aims to catalogue genetic diversity
Researchers release draft results from an ongoing effort to capture the entirety of human genetic variation.
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