Publications

The ISME journal. 2023-12-01; 17.12: 2147-2159.
Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics
Thukral M, Allen AE, Petras D
PMID: 37857709
The ISME journal. 2023-12-01; 17.12: 2459.
Publisher Correction: Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics
Thukral M, Allen AE, Petras D
PMID: 37993599
The New phytologist. 2023-11-29;
Two plastidial lysophosphatidic acid acyltransferases differentially mediate the biosynthesis of membrane lipids and triacylglycerols in Phaeodactylum tricornutum
You L, Połońska A, Jasieniecka-Gazarkiewicz K, Richard F, Jouhet J, Maréchal E, Banaś A, Hu H, Pan Y, Hao X, Jin H, Allen AE, Amato A, Gong Y
PMID: 38031462
ACS synthetic biology. 2023-11-17; 12.11: 3215-3228.
Validating a Promoter Library for Application in Plasmid-Based Diatom Genetic Engineering
Garza EA, Bielinski VA, Espinoza JL, Orlandi K, Alfaro JR, Bolt TM, Beeri K, Weyman PD, Dupont CL
PMID: 37857380
Nature genetics. 2023-11-09;
Circular extrachromosomal DNA promotes tumor heterogeneity in high-risk medulloblastoma
Chapman OS, Luebeck J, Sridhar S, Wong IT, Dixit D, Wang S, Prasad G, Rajkumar U, Pagadala MS, Larson JD, He BJ, Hung KL, Lange JT, Dehkordi SR, Chandran S, Adam M, Morgan L, Wani S, Tiwari A, Guccione C, Lin Y, Dutta A, Lo YY, Juarez E, Robinson JT, Korshunov A, Michaels JA, Cho YJ, Malicki DM, Coufal NG, Levy ML, Hobbs C, Scheuermann RH, Crawford JR, Pomeroy SL, Rich JN, Zhang X, Chang HY, Dixon JR, Bagchi A, Deshpande AJ, Carter H, Fraenkel E, Mischel PS, Wechsler-Reya RJ, Bafna V, Mesirov JP, Chavez L
PMID: 37945900
Journal of fungi (Basel, Switzerland). 2023-11-09; 9.11:
Evaluation of Different Gene Prediction Tools in Coccidioides immitis
Kirkland TN, Beyhan S, Stajich JE
PMID: 37998899
Nature communications. 2023-11-08; 14.1: 7215.
Short-term acidification promotes diverse iron acquisition and conservation mechanisms in upwelling-associated phytoplankton
Lampe RH, Coale TH, Forsch KO, Jabre LJ, Kekuewa S, Bertrand EM, Horák A, Oborník M, Rabines AJ, Rowland E, Zheng H, Andersson AJ, Barbeau KA, Allen AE
PMID: 37940668
Frontiers in immunology. 2023-10-19; 14.1220610.
Oral mucosa immunity: ultimate strategy to stop spreading of pandemic viruses
Jang H, Matsuoka M, Freire M
PMID: 37928529
Cell. 2023-10-06;
Vertebrate-class-specific binding modes of the alphavirus receptor MXRA8
Zimmerman O, Zimmerman MI, Raju S, Nelson CA, Errico JM, Madden EA, Holmes AC, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Palakurty S, Davis-Adams HG, Sun C, Gilliland T, Earnest JT, Ma H, Ebel GD, Zmasek C, Scheuermann RH, Klimstra WB, Fremont DH, Diamond MS
PMID: 37804831
Molecular biology and evolution. 2023-10-04; 40.10:
Genus-Wide Transcriptional Landscapes Reveal Correlated Gene Networks Underlying Microevolutionary Divergence in Diatoms
Walworth NG, Espinoza JL, Argyle PA, Hinners J, Levine NM, Doblin MA, Dupont CL, Collins S
PMID: 37874344

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