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Synthetic Genomics, Inc. Launched to Develop New Approaches to Biological Energy
Initial applications to focus on ethanol and hydrogen production
Major New Policy Study Will Explore Risks, Benefits of Synthetic Genomics
Genome Study of Beneficial Microbe May Help Boost Plant Health
In a study expected to greatly benefit crop plants, scientists have deciphered the genome of a root- and seed-dwelling bacterium that protects plants from diseases. The research provides clues to better explain how the helpful microbe, Pseudomonas fluorescens Pf-5, naturally safeguards roots and seeds from infection by pathogenic microbes.
TIGR President Wins ASM's Promega Biotechnology Research Award
TIGR President Claire M. Fraser has been awarded the 2005 Promega Biotechnology Research Award at the annual meeting of the American Society for Microbiology for her "outstanding contributions to the application of biotechnology through fundamental microbiological research and development."
The Inner Life of Sea Squirts
Innovative Study Finds Way to "Bio-Synthesize" an Anti-Cancer Compound
Scientists Gather for Microbial Genomics Conference
A decade after the dawn of the genomics era, some of the world's top scientists in the field of microbial genomics are gathering in Halifax, Canada, for the International Conference on Microbial Genomes. Speakers will discuss metagenomics, comparative genomics, population processes, genome evolution and environmental genomics.
Venter Institute Studies Microbes Living in Air
Air Genome Project to Sample Air Using Whole Genome Shotgun Sequencing
Sifting Through Fruitfly Sequences, Scientists Discover New Wolbachias
Finding the genomic equivalent of gold nuggets in the rough ore of a much larger set of data, TIGR scientists and collaborators have discovered the genomes of three new types of the microbe Wolbachia in fruitfly sequence data.
Venter Institute to Sequence More Than 100 Key Marine Microbes in One Year
Data To Help Scientists Study Biodiversity, Ecology, Evolution, and Health
Genome of Deadly Amoeba Shows Surprising Complexity; Study Reveals Evidence for Lateral Gene Transfer from Bacteria
The genome sequence of the parasitic amoeba Entamoeba histolytica, a leading cause of severe diarrheal disease in developing countries, includes an unexpectedly complex repertoire of sensory genes as well as a variety of bacterial-like genes that contribute to the organism's unique biology. TIGR scientists led the project, which presents the first genome-wide study of an amoeba. About 50 million people a year are infected by the parasite, which causes as many as 100,000 deaths annually.
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Understanding Complex Data through Better Visualization
Recently, researchers at JCVI reported on the Rhizoctonia solani mitochondrial genome which was the largest fungal mitochondrion to be sequenced to date. We showed that its unusually large size was probably due to the expansion of multiple genetic elements that populated the genome in somewhat...
JCVI Research Impact
JCVI ranks in the top 1% of research institutions worldwide for research impact based on an analysis of Elsevier and Thomson Reuters data. The ranking was done by looking at institutional publication reach as seen through the number of citations referencing them....
Trapping Microbes 750 miles north of the Arctic Circle
About 1% of all microbes are “culturable” in the lab. They are some of the most stubborn organisms requiring special and specific nutrients as well as optimal temperatures and conditions. So, how do we get the “unculturables” to be “culturable”? We make bacteria “traps”,...
Thule, Greenland Year Two
Sequence data from the previous year allowed us to determine the overall microbial population in each site and this year we decided to focus on the Rich Lake site which seem to have representation of nearly all microbes found in the other sites. So lucky for us we only had to work on one...
Scientist Spotlight: Meet Sarah Highlander
Sarah Highlander PhD is an esteemed scientist and professor who joined JCVI in La Jolla this year. She comes from a long line of academically successful Professors, including a great uncle who was a University Dean. As a young child, Sarah was influenced by her parents: her mother was...
Professional Development Opportunities this Summer
This summer we are offering two professional development workshops: GenomeSolver and Bioinformatics: Unlocking Life through Computation. Both explore bioinformatics, microbial diversity and the implementation in the undergradauate or high school classrooms. The GenomeSolver...
JCVI Hosts South African Scientists to Share Microbiome Research Techniques
Two scientists from the University of Cape Town, South Africa have joined Dr. Bill Nierman’s lab for the next month as part of NIH’s Human Heredity and Health in Africa (H3Africa) Initiative, a training program designed to build out technical biological skills in the African research...
Building the World's First Net-Zero Energy Lab [video]
Building the World's First Net-Zero Energy Lab And see the construction in time-lapes.
Amazon Expedition
Yesterday, JCVI expedition scientist Jeff Hoffman embarked from Manaus on a sampling expedition of the Amazon River and its tributaries, which contains 1/5th of the Earth’s river flow. In collaboration with scientists Dr. Guilherme Oliviera and Dr. Sara Cuadros from the Centro de Excelencia...
The 2014 Summer Internship Application is Open and Announcing the Genomics Scholar Program
The 2014 Summer Internship Application is now open. Last summer, we hosted 49 interns from a pool of 424 applicants. They presented their research in the First Annual Summer Internship Poster Sessions held in San Diego and Rockville. The posters were judged by a team of...
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Craig Venter: 20 years of decoding the human genome
The human genome is 99% decoded, the American geneticist Craig Venter announced two decades ago. What has the deciphering brought us since then?
Scientists in La Jolla Make Progress Understanding New Coronavirus Strain
Gene Drives: New and Improved
As the science advances, policy-makers and regulators need to develop responses that reflect the latest developments and the diversity of approaches and applications.
Pink shoes and a lab jacket: Finding your way as a female scientist
Women in science tell high school girls they, too, can change the world
PEOPLE IN YOUR NEIGHBORHOOD: Jazz piano in La Jolla scientist Clyde Hutchison’s DNA
How AI can help us decode immunity
Artificial intelligence and machine learning will be the keys to unraveling how the human immune system prevents and controls disease
Construction of an Escherichia coli genome with fewer codons sets records
The biggest synthetic genome so far has been made, with a smaller set of amino-acid-encoding codons than usual — raising the prospect of encoding proteins that contain unnatural amino-acid residues.
Public Health is the Next Big Thing at UC San Diego
Researchers have swapped the genome of gut germ E. coli for an artificial one
By creating a new genome, scientists could create organisms tailored to produce desirable compounds
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