Publications

Methods in enzymology. 2011-01-01; 498.349-61.
Enzymatic assembly of overlapping DNA fragments
Gibson DG
PMID: 21601685
PloS one. 2011-01-01; 6.12: e27587.
Proteogenomic analysis of bacteria and archaea: a 46 organism case study
Venter E, Smith RD, Payne SH
PMID: 22114679
Hepatology (Baltimore, Md.). 2011-01-01; 53.1: 96-105.
Enteric dysbiosis associated with a mouse model of alcoholic liver disease
Yan AW, Fouts DE, Brandl J, Stärkel P, Torralba M, Schott E, Tsukamoto H, Nelson KE, Brenner DA, Schnabl B
PMID: 21254165
PloS one. 2011-01-01; 6.12: e26554.
Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies
Pieper R, Zhang Q, Clark DJ, Huang ST, Suh MJ, Braisted JC, Payne SH, Fleischmann RD, Peterson SN, Tzipori S
PMID: 22087229
PloS one. 2010-12-31; 5.12: e15220.
Robust computational analysis of rRNA hypervariable tag datasets
Sipos M, Jeraldo P, Chia N, Qu A, Dhillon AS, Konkel ME, Nelson KE, White BA, Goldenfeld N
PMID: 21217830
BMC research notes. 2010-12-13; 3.334.
Quality control of the sheep bacterial artificial chromosome library, CHORI-243
Ratnakumar A, Kirkness EF, Dalrymple BP
PMID: 21144002
Nature biotechnology. 2010-12-01; 28.12: 1272-3.
Megabases for kilodollars
Algire M, Krishnakumar R, Merryman C
PMID: 21139611
Journal of integrative plant biology. 2010-12-01; 52.12: 1059-74.
Monitoring the expression of maize genes in developing kernels under drought stress using oligo-microarray
Luo M, Liu J, Lee RD, Scully BT, Guo B
PMID: 21106005
Biochemistry. 2010-11-30; 49.47: 10117-30.
A comparison of methanobactins from Methylosinus trichosporium OB3b and Methylocystis strain Sb2 predicts methanobactins are synthesized from diverse peptide precursors modified to create a common core for binding and reducing copper ions
Krentz BD, Mulheron HJ, Semrau JD, Dispirito AA, Bandow NL, Haft DH, Vuilleumier S, Murrell JC, McEllistrem MT, Hartsel SC, Gallagher WH
PMID: 20961038
Genome biology. 2010-11-25; 11.11: R114.
Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing
Zhao Q, Kirkness EF, Caballero OL, Galante PA, Parmigiani RB, Edsall L, Kuan S, Ye Z, Levy S, Vasconcelos AT, Ren B, de Souza SJ, Camargo AA, Simpson AJ, Strausberg RL
PMID: 21108794

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