Publications

PloS one. 2011-01-14; 6.1: e16016.
The temporal dynamics of differential gene expression in Aspergillus fumigatus interacting with human immature dendritic cells in vitro
Morton CO, Varga JJ, Hornbach A, Mezger M, Sennefelder H, Kneitz S, Kurzai O, Krappmann S, Einsele H, Nierman WC, Rogers TR, Loeffler J
PMID: 21264256
BMC genomics. 2011-01-11; 12.21.
Bioinformatic evidence for a widely distributed, ribosomally produced electron carrier precursor, its maturation proteins, and its nicotinoprotein redox partners
Haft DH
PMID: 21223593
PloS one. 2011-01-10; 6.1: e15950.
Monitoring the long-term molecular epidemiology of the pneumococcus and detection of potential 'vaccine escape' strains
Pandya GA, McEllistrem MC, Venepally P, Holmes MH, Jarrahi B, Sanka R, Liu J, Karamycheva SA, Bai Y, Fleischmann RD, Peterson SN
PMID: 21264340
Molecular microbiology. 2011-01-01; 79.1: 133-48.
A novel copper-responsive regulon in Mycobacterium tuberculosis
Festa RA, Jones MB, Butler-Wu S, Sinsimer D, Gerads R, Bishai WR, Peterson SN, Darwin KH
PMID: 21166899
Nucleic acids research. 2011-01-01; 39.Database issue: D612-9.
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
Aurrecoechea C, Barreto A, Brestelli J, Brunk BP, Caler EV, Fischer S, Gajria B, Gao X, Gingle A, Grant G, Harb OS, Heiges M, Iodice J, Kissinger JC, Kraemer ET, Li W, Nayak V, Pennington C, Pinney DF, Pitts B, Roos DS, Srinivasamoorthy G, Stoeckert CJ, Treatman C, Wang H
PMID: 20974635
PloS one. 2011-01-01; 6.12: e27587.
Proteogenomic analysis of bacteria and archaea: a 46 organism case study
Venter E, Smith RD, Payne SH
PMID: 22114679
Methods in enzymology. 2011-01-01; 498.349-61.
Enzymatic assembly of overlapping DNA fragments
Gibson DG
PMID: 21601685
Nature protocols. 2011-01-01; 6.1: 89-96.
Isolation of circular yeast artificial chromosomes for synthetic biology and functional genomics studies
Noskov VN, Chuang RY, Gibson DG, Leem SH, Larionov V, Kouprina N
PMID: 21212778
PloS one. 2011-01-01; 6.12: e26554.
Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies
Pieper R, Zhang Q, Clark DJ, Huang ST, Suh MJ, Braisted JC, Payne SH, Fleischmann RD, Peterson SN, Tzipori S
PMID: 22087229
PloS one. 2011-01-01; 6.12: e28886.
GlyGly-CTERM and rhombosortase: a C-terminal protein processing signal in a many-to-one pairing with a rhomboid family intramembrane serine protease
Haft DH, Varghese N
PMID: 22194940

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