Publications

Scientific reports. 2024-11-12; 14.1: 27637.
Major alteration of lung microbiome and the host responses in critically ill COVID-19 patients with high viral load
Bustos IG, Wiscovitch-Russo R, Singh H, Sievers BL, Matsuoka M, Freire M, Tan GS, Cala MP, Guerrero JL, Martin-Loeches I, Gonzalez-Juarbe N, Reyes LF
PMID: 39532981
Annual review of microbiology. 2024-11-07; 78.1: 213-232.
Molecular Mechanisms for Iron Uptake and Homeostasis in Marine Eukaryotic Phytoplankton
Lampe RH, Coale TH, McQuaid JB, Allen AE
PMID: 39018471
Nature communications. 2024-11-05; 15.1: 9525.
The gut microbiome is associated with susceptibility to febrile malaria in Malian children
Van Den Ham KM, Bower LK, Li S, Lorenzi H, Doumbo S, Doumtabe D, Kayentao K, Ongoiba A, Traore B, Crompton PD, Schmidt NW
PMID: 39500866
Cancers. 2024-10-02; 16.19:
Secondary Transcriptomic Analysis of Triple-Negative Breast Cancer Reveals Reliable Universal and Subtype-Specific Mechanistic Markers
Rapier-Sharman N, Spendlove MD, Poulsen JB, Appel AE, Wiscovitch-Russo R, Vashee S, Gonzalez-Juarbe N, Pickett BE
PMID: 39409999
Expert review of respiratory medicine. 2024-10-01; 18.10: 815-829.
The unique metabolic and lipid profiles of patients with severe COVID-19 compared to severe community-acquired pneumonia: a potential prognostic and therapeutic target
Ibáñez-Prada ED, Guerrero JL, Bustos IG, León L, Fuentes YV, Santamaría-Torres M, Restrepo-Martínez JM, Serrano-Mayorga CC, Mendez L, Gomez-Duque S, Santacruz CA, Conway-Morris A, Martín-Loeches I, Gonzalez-Juarbe N, Cala MP, Reyes LF
PMID: 39327745
Stroke. 2024-10-01; 55.10: e266-e268.
Unveiling Molecular Diversity in Cerebral Thrombi via Spatial Transcriptomics
Walker M, Federico E, Espinoza JL, Dupont CL
PMID: 39206540
Proceedings of the National Academy of Sciences of the United States of America. 2024-10-01; 121.40: e2319177121.
Molecular forecasting of domoic acid during a pervasive toxic diatom bloom
Brunson JK, Thukral M, Ryan JP, Anderson CR, Kolody BC, James CC, Chavez FP, Leaw CP, Rabines AJ, Venepally P, Fussy Z, Zheng H, Kudela RM, Smith GJ, Moore BS, Allen AE
PMID: 39298472
Scientific reports. 2024-09-28; 14.1: 22408.
Endemic, cosmopolitan, and generalist taxa and their habitat affinities within a coastal marine microbiome
James CC, Allen AE, Lampe RH, Rabines A, Barton AD
PMID: 39333653
PLoS pathogens. 2024-08-23; 20.8: e1012495.
Fitness factor genes conserved within the multi-species core genome of Gram-negative Enterobacterales species contribute to bacteremia pathogenesis
Mobley HLT, Anderson MT, Moricz BS, Severin GB, Holmes CL, Ottosen EN, Eichler T, Gupta S, Paudel S, Sinha R, Mason S, Himpsl SD, Brown AN, Gaca M, Kiser CM, Clarke TH, Fouts DE, DiRita VJ, Bachman MA
PMID: 39178317
Applied and environmental microbiology. 2024-08-21; 90.8: e0108324.
Metatranscriptomic response of deep ocean microbial populations to infusions of oil and/or synthetic chemical dispersant
Peña-Montenegro TD, Kleindienst S, Allen AE, Eren AM, McCrow JP, Arnold J, Joye SB
PMID: 39041797

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