Publications

Gut pathogens. 2023-09-20; 15.1: 44.
Whole-genome characterization of common rotavirus strains circulating in Vellore, India from 2002 to 2017: emergence of non-classical genomic constellations
Khakha SA, Varghese T, Giri S, Durbin A, Tan GS, Kalaivanan M, Prasad JH, Kang G
PMID: 37730725
ACS synthetic biology. 2023-09-15; 12.9: 2778-2782.
Improved Combinatorial Assembly and Barcode Sequencing for Gene-Sized DNA Constructs
Hernandez Hernandez D, Ding L, Murao A, Dahlin LR, Li G, Arnolds KL, Amezola M, Klein A, Mitra A, Mecacci S, Linger JG, Guarnieri MT, Suzuki Y
PMID: 37582217
iScience. 2023-09-15; 26.9: 107500.
Adaptive evolution of a minimal organism with a synthetic genome
Sandberg TE, Wise KS, Dalldorf C, Szubin R, Feist AM, Glass JI, Palsson BO
PMID: 37636038
mBio. 2023-08-31; 14.4: e0119423.
SARS-CoV-2 ORF6 protein does not antagonize interferon signaling in respiratory epithelial Calu-3 cells during infection
Li M, Ayyanathan K, Dittmar M, Miller J, Tapescu I, Lee JS, McGrath ME, Xue Y, Vashee S, Schultz DC, Frieman MB, Cherry S
PMID: 37377442
BMC infectious diseases. 2023-08-28; 23.1: 556.
Characteristics and genomic epidemiology of colistin-resistant Enterobacterales from farmers, swine, and hospitalized patients in Thailand, 2014-2017
Boonyasiri A, Brinkac LM, Jauneikaite E, White RC, Greco C, Seenama C, Tangkoskul T, Nguyen K, Fouts DE, Thamlikitkul V
PMID: 37641085
PloS one. 2023-08-03; 18.8: e0289557.
Comparison of DNA concentration and bacterial pathogen PCR detection when using two DNA extraction kits for nasopharyngeal/oropharyngeal samples
Khan D, Thomas SA, Tientcheu PE, Suso SMS, Dupont C, Kwambana-Adams B, Mohammed NI, Nicol MP, Antonio M
PMID: 37535692
BMC microbiology. 2023-08-02; 23.1: 206.
Common antibiotics, azithromycin and amoxicillin, affect gut metagenomics within a household
Chopyk J, Cobián Güemes AG, Ramirez-Sanchez C, Attai H, Ly M, Jones MB, Liu R, Liu C, Yang K, Tu XM, Abeles SR, Nelson K, Pride DT
PMID: 37528343
Applied and environmental microbiology. 2023-07-26; 89.7: e0031823.
Host and Water Microbiota Are Differentially Linked to Potential Human Pathogen Accumulation in Oysters
Diner RE, Zimmer-Faust A, Cooksey E, Allard S, Kodera SM, Kunselman E, Garodia Y, Verhougstraete MP, Allen AE, Griffith J, Gilbert JA
PMID: 37318344
Plants (Basel, Switzerland). 2023-07-20; 12.14:
Exploring the Proteomic Profile of Soybean Bran: Unlocking the Potential for Improving Protein Quality and Quantity
Molinari MDC, Fuganti-Pagliarini R, Yu Y, Florentino LH, Mertz-Henning LM, Lima RN, Bittencourt DMC, Freire MO, Rech E
PMID: 37514318
Journal of clinical microbiology. 2023-07-20; 61.7: e0019923.
Escherichia coli ST131 Associated with Increased Mortality in Bloodstream Infections from Urinary Tract Source
Brumwell A, Sutton G, Lantos PM, Hoffman K, Ruffin F, Brinkac L, Clarke TH, Adams MD, Fowler VG, Fouts DE, Thaden JT
PMID: 37338371

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