Publications

BMC genomics. 2006-12-28; 7.327.

Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR

PMID: 17194304

Abstract

Recently, genomic sequencing efforts were finished for Oryza sativa (cultivated rice) and Arabidopsis thaliana (Arabidopsis). Additionally, these two plant species have extensive cDNA and expressed sequence tag (EST) libraries. We employed the Program to Assemble Spliced Alignments (PASA) to identify and analyze alternatively spliced isoforms in both species.

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