Publications

Genome biology. 2001-01-01; 2.8: RESEARCH0027.

A clustering method for repeat analysis in DNA sequences

Volfovsky N, Haas BJ, Salzberg SL

PMID: 11532211

Abstract

A computational system for analysis of the repetitive structure of genomic sequences is described. The method uses suffix trees to organize and search the input sequences; this data structure has been used previously for efficient computation of exact and degenerate repeats.

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