Publications

Bioinformatics (Oxford, England). 2005-05-01; 21.9: 1782-8.
Efficient implementation of a generalized pair hidden Markov model for comparative gene finding
Majoros WH, Pertea M, Salzberg SL
PMID: 15691859
Applied and environmental microbiology. 2005-05-01; 71.5: 2530-8.
DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens
Methé BA, Webster J, Nevin K, Butler J, Lovley DR
PMID: 15870343
Nature methods. 2005-05-01; 2.5: 345-50.
Multiple-laboratory comparison of microarray platforms
Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W
PMID: 15846361
Vaccine. 2005-04-27; 23.23: 3084-95.
Subunit vaccine based on the p67 major surface protein of Theileria parva sporozoites reduces severity of infection derived from field tick challenge
Musoke A, Rowlands J, Nene V, Nyanjui J, Katende J, Spooner P, Mwaura S, Odongo D, Nkonge C, Mbogo S, Bishop R, Morzaria S
PMID: 15811656
Vaccine. 2005-04-15; 23.21: 2791-800.
Novel baculovirus-derived p67 subunit vaccines efficacious against East Coast fever in cattle
Kaba SA, Musoke AJ, Schaap D, Schetters T, Rowlands J, Vermeulen AN, Nene V, Vlak JM, van Oers MM
PMID: 15780727
Genome research. 2005-04-01; 15.4: 487-95.
Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis
Ayele M, Haas BJ, Kumar N, Wu H, Xiao Y, Van Aken S, Utterback TR, Wortman JR, White OR, Town CD
PMID: 15805490
PLoS biology. 2005-04-01; 3.4: e121.
The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode
Foster J, Ganatra M, Kamal I, Ware J, Makarova K, Ivanova N, Bhattacharyya A, Kapatral V, Kumar S, Posfai J, Vincze T, Ingram J, Moran L, Lapidus A, Omelchenko M, Kyrpides N, Ghedin E, Wang S, Goltsman E, Joukov V, Ostrovskaya O, Tsukerman K, Mazur M, Comb D, Koonin E, Slatko B
PMID: 15780005
Molecular biology and evolution. 2005-04-01; 22.4: 845-55.
Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice
Nagaki K, Neumann P, Zhang D, Ouyang S, Buell CR, Cheng Z, Jiang J
PMID: 15616142
Pharmacogenomics. 2005-04-01; 6.3: 245-58.
Genomic approaches for reconstructing gene networks
Lee NH
PMID: 16013956
Journal of bacteriology. 2005-04-01; 187.7: 2426-38.
Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain
Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, Ravel J, Paulsen IT, Kolonay JF, Brinkac L, Beanan M, Dodson RJ, Daugherty SC, Madupu R, Angiuoli SV, Durkin AS, Haft DH, Vamathevan J, Khouri H, Utterback T, Lee C, Dimitrov G, Jiang L, Qin H, Weidman J, Tran K, Kang K, Hance IR, Nelson KE, Fraser CM
PMID: 15774886

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