Publications

Molecular microbiology. 2005-05-01; 56.3: 625-37.
Promoter architecture and response to a positive regulator of archaeal transcription
Ouhammouch M, Langham GE, Hausner W, Simpson AJ, El-Sayed NM, Geiduschek EP
PMID: 15819620
Nature methods. 2005-05-01; 2.5: 337-44.
Independence and reproducibility across microarray platforms
Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J
PMID: 15846360
Plant physiology. 2005-05-01; 138.1: 18-26.
The institute for genomic research Osa1 rice genome annotation database
Yuan Q, Ouyang S, Wang A, Zhu W, Maiti R, Lin H, Hamilton J, Haas B, Sultana R, Cheung F, Wortman J, Buell CR
PMID: 15888674
Applied and environmental microbiology. 2005-05-01; 71.5: 2209-13.
Toward a system of microbial forensics: from sample collection to interpretation of evidence
Budowle B, Schutzer SE, Ascher MS, Atlas RM, Burans JP, Chakraborty R, Dunn JJ, Fraser CM, Franz DR, Leighton TJ, Morse SA, Murch RS, Ravel J, Rock DL, Slezak TR, Velsko SP, Walsh AC, Walters RA
PMID: 15870301
Plant physiology. 2005-05-01; 138.1: 38-46.
Databases and information integration for the Medicago truncatula genome and transcriptome
Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, Town CD, Young ND, Retzel EF
PMID: 15888676
Bioinformatics (Oxford, England). 2005-05-01; 21.9: 1782-8.
Efficient implementation of a generalized pair hidden Markov model for comparative gene finding
Majoros WH, Pertea M, Salzberg SL
PMID: 15691859
Journal of bacteriology. 2005-05-01; 187.10: 3339-51.
Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans
Schmid AK, Howell HA, Battista JR, Peterson SN, Lidstrom ME
PMID: 15866918
Applied and environmental microbiology. 2005-05-01; 71.5: 2530-8.
DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens
Methé BA, Webster J, Nevin K, Butler J, Lovley DR
PMID: 15870343
Nature methods. 2005-05-01; 2.5: 345-50.
Multiple-laboratory comparison of microarray platforms
Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W
PMID: 15846361
Medical mycology. 2005-05-01; 43 Suppl 1.S313-9.
The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus
Ferreira ME, Colombo AL, Paulsen I, Ren Q, Wortman J, Huang J, Goldman MH, Goldman GH
PMID: 16110826

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