Publications

Genome biology. 2013-02-01; 14.2: R11.
Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling
Clarke M, Lohan AJ, Liu B, Lagkouvardos I, Roy S, Zafar N, Bertelli C, Schilde C, Kianianmomeni A, Bürglin TR, Frech C, Turcotte B, Kopec KO, Synnott JM, Choo C, Paponov I, Finkler A, Heng Tan CS, Hutchins AP, Weinmeier T, Rattei T, Chu JS, Gimenez G, Irimia M, Rigden DJ, Fitzpatrick DA, Lorenzo-Morales J, Bateman A, Chiu CH, Tang P, Hegemann P, Fromm H, Raoult D, Greub G, Miranda-Saavedra D, Chen N, Nash P, Ginger ML, Horn M, Schaap P, Caler L, Loftus BJ
PMID: 23375108
Molecular microbiology. 2013-02-01; 87.3: 672-89.
The group A streptococcal collagen-like protein-1, Scl1, mediates biofilm formation by targeting the extra domain A-containing variant of cellular fibronectin expressed in wounded tissue
Oliver-Kozup H, Martin KH, Schwegler-Berry D, Green BJ, Betts C, Shinde AV, Van De Water L, Lukomski S
PMID: 23217101
Molecular bioSystems. 2013-01-27; 9.1: 44-54.
A multi-omic systems approach to elucidating Yersinia virulence mechanisms
Ansong C, Schrimpe-Rutledge AC, Mitchell HD, Chauhan S, Jones MB, Kim YM, McAteer K, Deatherage Kaiser BL, Dubois JL, Brewer HM, Frank BC, McDermott JE, Metz TO, Peterson SN, Smith RD, Motin VL, Adkins JN
PMID: 23147219
Virology journal. 2013-01-25; 10.32.
Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961-2009
Abernathy E, Chen MH, Bera J, Shrivastava S, Kirkness E, Zheng Q, Bellini W, Icenogle J
PMID: 23351667
Chemistry & biology. 2013-01-24; 20.1: 123-33.
Identification of widespread adenosine nucleotide binding in Mycobacterium tuberculosis
Ansong C, Ortega C, Payne SH, Haft DH, Chauvignè-Hines LM, Lewis MP, Ollodart AR, Purvine SO, Shukla AK, Fortuin S, Smith RD, Adkins JN, Grundner C, Wright AT
PMID: 23352146
Cancer research. 2013-01-15; 73.2: 725-35.
SMAD2, SMAD3 and SMAD4 mutations in colorectal cancer
Fleming NI, Jorissen RN, Mouradov D, Christie M, Sakthianandeswaren A, Palmieri M, Day F, Li S, Tsui C, Lipton L, Desai J, Jones IT, McLaughlin S, Ward RL, Hawkins NJ, Ruszkiewicz AR, Moore J, Zhu HJ, Mariadason JM, Burgess AW, Busam D, Zhao Q, Strausberg RL, Gibbs P, Sieber OM
PMID: 23139211
Science progress. 2013-01-01; 96.Pt 2: 153-70.
Microbiome in human health and disease
Madupu R, Szpakowski S, Nelson KE
PMID: 23901633
Current topics in microbiology and immunology. 2013-01-01; 363.21-41.
Studying Salmonellae and Yersiniae host-pathogen interactions using integrated 'omics and modeling
Ansong C, Deatherage BL, Hyduke D, Schmidt B, McDermott JE, Jones MB, Chauhan S, Charusanti P, Kim YM, Nakayasu ES, Li J, Kidwai A, Niemann G, Brown RN, Metz TO, McAteer K, Heffron F, Peterson SN, Motin V, Palsson BO, Smith RD, Adkins JN
PMID: 22886542
Journal of bioscience and bioengineering. 2013-01-01; 115.1: 58-63.
Adaptation of soil microbes during establishment of microbial fuel cell consortium fed with lactate
Futamata H, Bretschger O, Cheung A, Kan J, Owen R, Nealson KH
PMID: 22902277
Nucleic acids research. 2013-01-01; 41.Database issue: D387-95.
TIGRFAMs and Genome Properties in 2013
Haft DH, Selengut JD, Richter RA, Harkins D, Basu MK, Beck E
PMID: 23197656

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