Publications

Cell metabolism. 2017-05-02; 25.5: 1054-1062.e5.
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE
PMID: 28467925
Journal of bacteriology. 2017-05-01; 199.9:
Assessment of Insertion Sequence Mobilization as an Adaptive Response to Oxidative Stress in Acinetobacter baumannii Using IS-seq
Wright MS, Mountain S, Beeri K, Adams MD
PMID: 28193905
Genome research. 2017-05-01; 27.5: 722-736.
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM
PMID: 28298431
Oncotarget. 2017-04-25; 8.17: 27786-27799.
Analysis of variability in high throughput screening data: applications to melanoma cell lines and drug responses
Ding KF, Finlay D, Yin H, Hendricks WPD, Sereduk C, Kiefer J, Sekulic A, LoRusso PM, Vuori K, Trent JM, Schork NJ
PMID: 28212541
Nucleic acids research. 2017-04-20; 45.7: e50.
Efficient size-independent chromosome delivery from yeast to cultured cell lines
Brown DM, Chan YA, Desai PJ, Grzesik P, Oldfield LM, Vashee S, Way JC, Silver PA, Glass JI
PMID: 27980064
BMC genomics. 2017-04-13; 18.1: 296.
Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
Greenwald WW, Klitgord N, Seguritan V, Yooseph S, Venter JC, Garner C, Nelson KE, Li W
PMID: 28407798
Advances in microbial physiology. 2017-04-03; 70.261-313.
Metal Resistance and Its Association With Antibiotic Resistance
Pal C, Asiani K, Arya S, Rensing C, Stekel DJ, Larsson DGJ, Hobman JL
PMID: 28528649
Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine. 2017-04-01; 30.2: 307-311.
Bacterial resistance to arsenic protects against protist killing
Hao X, Li X, Pal C, Hobman J, Larsson DG, Saquib Q, Alwathnani HA, Rosen BP, Zhu YG, Rensing C
PMID: 28210928
Journal of neurovirology. 2017-04-01; 23.2: 171-185.
HSV-1 clinical isolates with unique in vivo and in vitro phenotypes and insight into genomic differences
Danaher RJ, Fouts DE, Chan AP, Choi Y, Depew J, McCorrison JM, Nelson KE, Wang C, Miller CS
PMID: 27739035
Antimicrobial agents and chemotherapy. 2017-04-01; 61.4:
Global Molecular Epidemiology of IMP-Producing Enterobacteriaceae
Matsumura Y, Peirano G, Motyl MR, Adams MD, Chen L, Kreiswirth B, Devinney R, Pitout JD
PMID: 28167555

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