Recent News
18-May-09: Data Release 7.0 with 16 new Bacillus genomes.

23-April-09: Web Version 4.1 released. This update includes several bug fixes and enhancements.

Highlighted Tools
Protein Interactions
Semantic Medline
Virulence Search
Epitope Search

Recent News
15-July-09: Data release 9.0 released. Five (5) new genomes were added.

23-April-09: Web Version 4.1 released. This update includes several bug fixes and enhancements.

Highlighted Tools
Semantic Medline
Evidence Comparison Heat Map
Clostox Phylogeny Viewer

Recent News
23-April-09: Data Release 7.0 is now available. Twelve (12) new genomes have been added to Pathema - Burkholderia. Website version 6.1 has been released. This release includes several bug fixes and tool enhancements.

3-Nov-08: Statistics from recent Annotation Jamboree released.

Highlighted Tools
Protein Interactions
Semantic Medline
Virulence Search
Epitope Search

Recent News
1-April-08: Data Release 6.0 was released. This release includes two new genomes.

Upcoming Releases
July-2009 Data release 7.0 scheduled for release. Includes updated annotation of all organims.

Note to All Pathema Users


The Pathema BRC contract ends in December 2009. At that time JCVI will cease maintenance of the Pathema web resource and data. The PATRIC team, located at the Virginia Bioinformatics Institute, created and maintains a consolidated BRC for all of the NIAID category A-C priority pathogenic bacteria. The EuPathDB team at the University of Pennsylvania will support all eukaryotic pathogens. Pathema transferred all data and software to PATRIC and EuPathDB for incorporation into their new Web-based bioinformatics resource. Please feel free to contact us if you have any questions about this transition.
Six Target Pathogens

Bacillus anthracis
Clostridium botulinum
Burkholderia mallei
Burkholderia pseudomallei
Clostridium perfringens
Entamoeba histolytica
Pathema Highlights

News Update
August 2009: Burkholderia and Bacillus have incorporated data from the Microbial Protein Interaction Database (MPIDB).

August 2009: Pathema now supports the data and curation of 120 organisms
Pathema Documentation
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Value Addition Statistics
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